General information
Regulator | CatR |
---|---|
Gene identifier | SCO5206 - SC7E4.03c |
Family | Fur |
Regulation type | Repressor |
Function | H2O2-responsive repressor |
Organism | Streptomyces coelicolor |
External links
Sequence logo
Logo
Based on 4 sites.
Position Frequency Matrix
PFMT | 4 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 4 | 0 | 3 | 0 | 0 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G | 0 | 3 | 4 | 0 | 0 | 0 | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 0 |
C | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 4 | 1 | 0 | 0 |
A | 0 | 1 | 0 | 4 | 1 | 2 | 0 | 2 | 2 | 0 | 0 | 0 | 4 | 4 |
Position Weight Matrix
PWMT | 2.14 | -1.32 | -1.32 | -1.32 | 0.49 | -1.32 | 0.49 | 0.49 | -1.32 | 2.14 | -1.32 | 1.77 | -1.32 | -1.32 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G | -1.32 | 1.77 | 2.14 | -1.32 | -1.32 | -1.32 | 1.77 | 0.49 | 1.26 | -1.32 | -1.32 | -1.32 | -1.32 | -1.32 |
C | -1.32 | -1.32 | -1.32 | -1.32 | 1.26 | 1.26 | -1.32 | -1.32 | -1.32 | -1.32 | 2.14 | 0.49 | -1.32 | -1.32 |
A | -1.32 | 0.49 | -1.32 | 2.14 | 0.49 | 1.26 | -1.32 | 1.26 | 1.26 | -1.32 | -1.32 | -1.32 | 2.14 | 2.14 |
Hidden Markov Model (HMM)
Consensus | TGGA-CG-GTCTAA |
---|---|
Alignment length | 15 |
Animate |
|
Node Repulsion | |
Ideal Edge Length | |
Loading...
Gene ID | Location | Orientation | Binding sequence | Method | Reference |
---|---|---|---|---|---|
-66 | - | ATGGACAGTGTCTAA | ChIP-PCR | Y. Kim et al. (2021) | |
-42 | - | TTGGACAGGATCTAA | ChIP-PCR | Y. Kim et al. (2021) | |
-23 | - | GTGGAACGAGTCCAA | ChIP-PCR | Y. Kim et al. (2021) | |
-37 | + | TTAGATCTAATCTAA | ChIP-PCR | Y. Kim et al. (2021) |
Region | Location | Orientation | Score | Binding sequence | Method |
---|---|---|---|---|---|
12053:12067 | - | 17.98676449 | TCGGAATCGGTCCA | pwm | |
340738:340752 | - | 19.26687241 | TTAGAGTCGGCCCA | pwm | |
393440:393454 | - | 24.53365895 | TTAGATCCTGTCCA | pwm | |
393441:393455 | + | 18.10837269 | TAGATCCTGTCCAA | pwm | |
820202:820216 | - | 21.97344311 | TTGGACCAGGTCCA | pwm | |
1708037:1708051 | + | 20.57172699 | AAGACCGAGTCTAA | pwm | |
2110384:2110398 | - | 17.98676449 | TTTGACCCGGTCCC | pwm | |
2157930:2157944 | + | 18.39240329 | AGGACAGAATCTAC | pwm | |
2177580:2177594 | - | 23.25355103 | TTGGACTCGTTCCA | pwm | |
2220641:2220655 | + | 18.35873327 | TCGACCGTGTCGAA | pwm | |
2334622:2334636 | - | 18.39240329 | TGAGACTCGGGCCA | pwm | |
2416377:2416391 | + | 17.98676449 | TGGACCGTGCCGAA | pwm | |
2786486:2786500 | + | 20.66858853 | TGGATCGGGTCGAA | pwm | |
2812220:2812234 | - | 19.63884119 | TTCGACGCGGTCCA | pwm | |
3033268:3033282 | + | 17.98676449 | TGGACAAGATCTGA | pwm | |
3103596:3103610 | - | 20.29661975 | TCAGACCCGTTCCA | pwm | |
3141736:3141750 | - | 18.39240329 | TTAGCCTCGGTCCC | pwm | |
3391913:3391927 | + | 18.39240329 | GGGACCGAGCCTAA | pwm | |
3741488:3741502 | + | 19.38848061 | TGGAGATTGTCCAA | pwm | |
3935697:3935711 | - | 21.07422733 | GTAGACACGGTCCA | pwm | |
4077317:4077331 | + | 17.98676449 | TGGAGCGAGTCCCA | pwm | |
4081031:4081045 | + | 17.98676449 | TCGACCGGGTCTGA | pwm | |
4378142:4378156 | - | 18.35873327 | TTCGACACGGTCGA | pwm | |
4902817:4902831 | - | 18.86123361 | TTCGAGCCGGTCCA | pwm | |
5072639:5072653 | - | 19.38848061 | TTCGACCAGATCCA | pwm | |
5380825:5380839 | + | 18.39240329 | TGGCCAGAATCTCA | pwm | |
5421666:5421680 | + | 21.97344311 | TAGATCTAATCTAA | pwm | |
5667426:5667440 | - | 24.53365895 | TTAGACACTGTCCA | pwm | |
6010097:6010111 | + | 19.79411941 | AGGACATTGTCTAA | pwm | |
6131216:6131230 | + | 17.73640391 | GAGAACTGATCTAA | pwm | |
7056189:7056203 | + | 21.44619611 | TGGACAGATTCCAA | pwm | |
7602645:7602659 | + | 17.98676449 | CGGACCGGGTCAAA | pwm | |
7766283:7766297 | - | 19.38848061 | TTCGACCAGATCCA | pwm | |
7769985:7769999 | + | 17.98676449 | AGGACCGGGTCGAA | pwm | |
7810157:7810171 | + | 18.76437207 | TGGACCGAATCGAG | pwm | |
7897326:7897340 | + | 17.98676449 | TGGACCGGGTCGAT | pwm | |
7905486:7905500 | - | 17.98676449 | TTCGGCCCGGTCCA | pwm | |
7995547:7995561 | - | 18.39240329 | GTAGGTTCGGTCCA | pwm | |
8188584:8188598 | - | 17.98676449 | GTTGACCCGGTCCA | pwm | |
8457235:8457249 | - | 18.48926483 | TCAGACCCCGTCCA | pwm | |
8655440:8655454 | + | 17.98676449 | TGGACCGATTCCGA | pwm | |
114800:114814 | + | 17.98676449 | TGCACAGCATCCAA | pwm | |
1016:1030 | + | 17.98676449 | TGGACCGGATCAGA | pwm | |
11721:11735 | + | 19.79411941 | TGGACCGTAGCCAA | pwm | |
44932:44948 | + | 1.8 | CTGGAGCGCCTCCAC | hmm | |
194514:194530 | - | 1.0 | CCGGGACCGGGTCCA | hmm | |
204124:204140 | - | 1.1 | ACGGGACCGCGTCCA | hmm | |
228549:228565 | - | 1.0 | GACGGAGAGCATCCA | hmm | |
267447:267463 | - | 0.1 | TGTCGACCTCGTCCA | hmm | |
267351:267367 | - | 0.4 | TGGTCAGCTCGCGGT | hmm | |
340738:340754 | - | 0.1 | CATGGGCCGACTCTAA | hmm | |
393440:393456 | - | 5.5 | CTTGGACAGGATCTAA | hmm | |
393439:393455 | + | 2.1 | TTAGATCCTGTCCAA | hmm | |
503458:503474 | + | 1.2 | CAGGAGCGCATCCAT | hmm | |
638177:638193 | - | 0.7 | CCTGGAGTCCATCTA | hmm | |
820202:820218 | - | 4.9 | CCTGGACCTGGTCCAA | hmm | |
820201:820217 | + | 2.0 | TTGGACCAGGTCCAG | hmm | |
1017865:1017881 | - | 0.7 | CGTCGAAAGGGTCGAA | hmm | |
1061858:1061874 | + | 0.3 | GCGGACCCTGTCTAC | hmm | |
1076702:1076718 | - | 0.3 | TGTCGAAAGGATCGA | hmm | |
1136620:1136636 | - | 0.4 | ACGGGAACTGATCGAA | hmm | |
1146384:1146400 | - | 3.0 | CATGGAGCTGATCCA | hmm | |
1224377:1224393 | + | 0.8 | CAGGAGCGGATCGAA | hmm | |
1235403:1235419 | - | 0.3 | GATGTATCGGGTCCA | hmm | |
1325269:1325285 | - | 0.2 | CGTGGACGGATTCTA | hmm | |
1467533:1467549 | - | 0.4 | AATGGAGCTCACCTA | hmm | |
1535793:1535809 | - | 0.9 | CCTGGACGACGTCTA | hmm | |
1759960:1759976 | + | 2.1 | GTCGATCTCGTCCAA | hmm | |
1812134:1812150 | + | 0.1 | CTGGACGGCTTCCAC | hmm | |
1850978:1850994 | + | 1.9 | GGGGAAAGGGTCTAC | hmm | |
1940574:1940590 | - | 2.9 | CGAGGAGCGGATCTA | hmm | |
1948187:1948203 | + | 0.7 | CGGGACGGCGTCTAC | hmm | |
2110384:2110400 | - | 1.4 | GCGGGACCGGGTCAAA | hmm | |
2157928:2157944 | + | 2.1 | CAGGACAGAATCTAC | hmm | |
2177580:2177596 | - | 5.8 | AGTGGAACGAGTCCAA | hmm | |
2220639:2220655 | + | 1.4 | CTCGACCGTGTCGAA | hmm | |
2232091:2232107 | - | 1.3 | CCTGGATGTCGTCTA | hmm | |
2242949:2242965 | + | 1.1 | CTGGACGTCGTCCAC | hmm | |
2322259:2322275 | - | 1.1 | TCAGGAGAGAGTCCA | hmm | |
2366225:2366241 | + | 0.5 | GTGGATCGACTTCAA | hmm | |
2380476:2380492 | - | 1.0 | CATGGAACTCCTCAA | hmm | |
2415910:2415926 | - | 2.1 | GGAGGATCTCGTCTA | hmm | |
2416375:2416391 | + | 0.3 | ATGGACCGTGCCGAA | hmm | |
2420309:2420325 | - | 2.2 | GGAGGACCTGGTCTA | hmm | |
2662420:2662436 | - | 1.0 | CGAAGACCGCGTCCA | hmm | |
2750901:2750917 | - | 0.1 | CCGGGAAGTGATCCAA | hmm | |
2769857:2769873 | + | 1.2 | CGGGACCGAATCCAT | hmm | |
2786484:2786500 | + | 3.3 | GTGGATCGGGTCGAA | hmm | |
2812220:2812236 | - | 3.6 | CGTGGACCGCGTCGAA | hmm | |
2834936:2834952 | + | 1.5 | CTGGAGCGCCTCGAA | hmm | |
2844223:2844239 | + | 0.4 | GTGAATCGCGTCAAA | hmm | |
2980279:2980295 | - | 1.7 | ACTGGAACGACTCCA | hmm | |
2980238:2980254 | + | 0.6 | GTAGACGGCGTCCAC | hmm | |
2980239:2980255 | - | 0.2 | CGTGGACGCCGTCTA | hmm | |
3033267:3033283 | - | 0.3 | CTCAGATCTTGTCCA | hmm | |
3042475:3042491 | + | 0.7 | GCGGAAATCATCCAG | hmm | |
3186321:3186337 | + | 1.0 | ACGGAGTCAATCTAA | hmm | |
3256961:3256977 | + | 2.9 | GTAGAGCGCGTCCAT | hmm | |
3344405:3344421 | + | 3.9 | CTGGAGCGCATCCAT | hmm | |
3373046:3373066 | - | 1.1 | CATGGACCGCAACTGTCTA | hmm | |
3378763:3378779 | + | 1.3 | CCGGATCTCGTCCAG | hmm | |
3391911:3391927 | + | 0.3 | CGGGACCGAGCCTAA | hmm | |
3422212:3422228 | - | 1.7 | GATGGAACTCGACTAA | hmm | |
3426197:3426213 | + | 0.2 | CTGGACATCGACTAC | hmm | |
3617898:3617914 | - | 0.3 | CACGGAGCACATCTA | hmm | |
3661440:3661456 | + | 0.8 | CTCGAACGAATCCAC | hmm | |
3661467:3661483 | + | 0.7 | CTCGAACGGATCCAC | hmm | |
3741486:3741502 | + | 4.4 | ATGGAGATTGTCCAA | hmm | |
3793448:3793464 | + | 0.7 | GTGGACGTCGTCCAG | hmm | |
3812647:3812663 | - | 2.8 | CATGGAGCGCTTCTA | hmm | |
3899505:3899521 | - | 0.1 | TGCGGACCGCCTCCAA | hmm | |
3935697:3935713 | - | 4.8 | CGTGGACCGTGTCTA | hmm | |
3935696:3935712 | + | 0.1 | GTAGACACGGTCCAC | hmm | |
3943157:3943173 | + | 3.0 | ATGGACCTCATCCAG | hmm | |
3951731:3951747 | + | 0.7 | GTGGACGTCGTCCAG | hmm | |
3954224:3954240 | - | 3.0 | GGTGGAGCTCGTCCA | hmm | |
3954748:3954764 | - | 0.8 | CTGGGAGCTCGTCCA | hmm | |
4189670:4189686 | - | 3.0 | GGCGGACCGCGTCTA | hmm | |
4251245:4251261 | - | 0.6 | GCAGGACCTCATCCA | hmm | |
4310373:4310389 | + | 0.6 | CCGGACAGGCTCTAG | hmm | |
4378142:4378158 | - | 1.6 | GTTCGACCGTGTCGAA | hmm | |
4389050:4389066 | + | 0.8 | CCGGACAGTGCCTAA | hmm | |
4501299:4501315 | - | 1.3 | CCTGGACCGGCTCCA | hmm | |
4501298:4501314 | + | 1.3 | GTGGAGCCGGTCCAG | hmm | |
4546967:4546983 | - | 1.1 | TCTCGATCGGATCGAA | hmm | |
4576151:4576167 | - | 1.0 | CCCGGAGCGGGTCCA | hmm | |
4587626:4587642 | + | 1.4 | CAGGAGCGAGTCCAG | hmm | |
4670002:4670018 | + | 0.7 | TGGGAGATCATCCAC | hmm | |
4674341:4674357 | + | 1.0 | GAGGACCTCGTCCAC | hmm | |
4750500:4750516 | - | 1.1 | GACGGAACGGTTCTA | hmm | |
4777618:4777634 | + | 1.6 | TGGGACCGGATCCAG | hmm | |
4886850:4886866 | - | 2.8 | ACTGGAACTCATCCA | hmm | |
4902817:4902833 | - | 1.4 | GATGGACCGGCTCGAA | hmm | |
4915698:4915714 | + | 3.0 | CTGGAGCGGTTCTAC | hmm | |
4951950:4951966 | - | 0.4 | CCCGGATCCGGTCTA | hmm | |
4961941:4961957 | - | 0.8 | CTTCGAGCTGGTCCA | hmm | |
5072639:5072655 | - | 2.9 | TCTGGATCTGGTCGAA | hmm | |
5076293:5076309 | - | 0.7 | CCGGGAGCTCATCCA | hmm | |
5076922:5076938 | - | 1.3 | CACGGAGCGCGTCCA | hmm | |
5081661:5081677 | - | 1.1 | TCCGGAGCTCGTCGAA | hmm | |
5133096:5133112 | - | 3.0 | GCTGGATCACGTCTA | hmm | |
5215127:5215143 | + | 1.9 | GTAGAGCTTGTCCAC | hmm | |
5215128:5215144 | - | 0.3 | GGTGGACAAGCTCTA | hmm | |
5283173:5283189 | - | 0.2 | GCTTGAACGTGTTCAA | hmm | |
5283128:5283144 | - | 0.2 | TTTTGAACGCGTTCAA | hmm | |
5283126:5283142 | + | 0.1 | CTTGAACGCGTTCAA | hmm | |
5297538:5297554 | - | 0.1 | GTTCGACCTCATCGAA | hmm | |
5376440:5376456 | - | 3.2 | CAAGGAACGTGTCTA | hmm | |
5421664:5421680 | + | 2.3 | TTAGATCTAATCTAA | hmm | |
5667426:5667442 | - | 6.0 | AATGGACAGTGTCTAA | hmm | |
5667218:5667234 | + | 1.0 | GGGGAGCTTGTCCAC | hmm | |
5667425:5667441 | + | 0.2 | TTAGACACTGTCCAT | hmm | |
5702382:5702399 | + | 0.7 | GTGGATCCTGGTCTAA | hmm | |
5715758:5715774 | - | 0.6 | AGTGGAACTGGCCTA | hmm | |
5773015:5773031 | + | 1.1 | TTCGAGCGCGTCCAC | hmm | |
5831342:5831358 | - | 1.0 | CCAGGACCTGGTCCA | hmm | |
6010095:6010111 | + | 3.1 | TAGGACATTGTCTAA | hmm | |
6023340:6023356 | + | 0.3 | CGGGACTGAGTCCAC | hmm | |
6025035:6025051 | + | 1.4 | CTGGAGAAGATCTAC | hmm | |
6029088:6029104 | - | 1.3 | CGTGGAATAGGTCTA | hmm | |
6172756:6172772 | - | 1.1 | GGTGGAGCGCGCCCAA | hmm | |
6325768:6325784 | + | 0.2 | GTGGAGATCACCTAC | hmm | |
6347416:6347432 | - | 1.1 | CCTCGAGCGAGTCGAA | hmm | |
6495568:6495584 | - | 0.9 | CTTCGAGCGCATCCA | hmm | |
6708517:6708533 | + | 0.5 | CCGGAACGTCTCCAA | hmm | |
6844215:6844231 | - | 1.1 | CGAGGAGATCGTCCA | hmm | |
6850598:6850614 | - | 1.5 | CCCGGAACGCGTCCA | hmm | |
6867551:6867567 | - | 0.9 | GGCGGACCTGGTCCA | hmm | |
7056187:7056203 | + | 3.5 | ATGGACAGATTCCAA | hmm | |
7056188:7056204 | - | 0.2 | CTTGGAATCTGTCCA | hmm | |
7132171:7132187 | + | 1.4 | TAGGAGATCGTCTAC | hmm | |
7193502:7193518 | + | 0.6 | GGGGACCGGCTCTAC | hmm | |
7295113:7295129 | - | 2.4 | GGTCGACCGCATCTA | hmm | |
7339138:7339154 | + | 1.4 | GAGGACCGGGTCCAC | hmm | |
7347424:7347440 | + | 1.3 | CTCGACAGGGTCCAT | hmm | |
7402637:7402653 | - | 0.1 | CGCGGACCGCTTCGAA | hmm | |
7415352:7415368 | + | 0.3 | CAGGAGCATGTCCAG | hmm | |
7485148:7485164 | - | 0.4 | CGTTGACCTTGTCCA | hmm | |
7546999:7547015 | - | 0.4 | CGTTGACCTTGTCCA | hmm | |
7602643:7602659 | + | 1.6 | ACGGACCGGGTCAAA | hmm | |
7766283:7766299 | - | 2.9 | GCTGGATCTGGTCGAA | hmm | |
7769983:7769999 | + | 0.8 | GAGGACCGGGTCGAA | hmm | |
7850106:7850122 | - | 1.4 | CGTGGAGACCATCCA | hmm | |
7953946:7953962 | - | 1.1 | AGGGGAGCGCGTCCA | hmm | |
7977344:7977360 | - | 0.1 | TTTGCATCGTGTCCA | hmm | |
7995547:7995563 | - | 1.5 | CATGGACCGAACCTA | hmm | |
8023697:8023713 | + | 0.9 | GTGGACGGCATCGAA | hmm | |
8073103:8073119 | + | 1.3 | GTTGAACTGGTCTAC | hmm | |
8163840:8163856 | + | 0.2 | CCGGATTGTGTCGAA | hmm | |
8188724:8188740 | + | 1.7 | GAGGAACGTGTCCAC | hmm | |
8407487:8407503 | - | 1.1 | GTCGGACCGCTTCTA | hmm | |
8410483:8410499 | - | 1.1 | GGTCGAGCGGGTCCA | hmm | |
8474654:8474670 | + | 1.7 | ACGGATCGCGTCCAG | hmm | |
8477299:8477316 | - | 0.4 | GTTGGACCTGGGTCCAA | hmm | |
8536910:8536926 | + | 1.7 | ATGGAGAACGTCCAG | hmm | |
8555025:8555041 | + | 0.5 | CTGGAGATCTTCGAA | hmm | |
8588950:8588966 | + | 2.3 | GTGGACAGTTTCCAC | hmm | |
8588951:8588967 | - | 1.5 | TGTGGAAACTGTCCA | hmm | |
8601239:8601255 | + | 0.8 | ATGGAACGCGGCCAA | hmm | |
8608785:8608801 | + | 1.6 | CTGGAACGTCTCCAG | hmm | |
156034:156050 | - | 0.7 | TGGCCGACCAGGGCT | hmm | |
161177:161193 | + | 0.7 | GGGGTGCCGGTGACG | hmm | |
184842:184858 | + | 3.4 | TCCTCACCCAACACT | hmm | |
249693:249709 | + | 2.0 | TCCCGTGACCCGGCC | hmm | |
252707:252723 | - | 0.4 | ACGAGTTCGAAGCAAT | hmm | |
274631:274647 | + | 0.3 | GAAACAGCGAGCAGA | hmm | |
32507:32523 | + | 0.5 | CTGGAGCACCTCTAC | hmm | |
107940:107956 | - | 1.0 | CGCGGAGCGCGTCCA | hmm | |
114798:114814 | + | 0.4 | GTGCACAGCATCCAA | hmm | |
156034:156050 | - | 0.7 | CAGGGAAAGGATCCA | hmm | |
179619:179635 | - | 0.4 | GGTAGAACGCCTCCA | hmm | |
206678:206694 | + | 4.1 | CTGGAACGCGTCCAG | hmm | |
250301:250317 | + | 1.0 | TGGGACATCGTCCAC | hmm | |
260804:260820 | - | 1.5 | CGTTGATCGCATCCA | hmm | |
267351:267367 | - | 0.4 | GTGGGAAACGGTCTA | hmm | |
323500:323516 | - | 0.5 | GCTGGAGCACCTCTA | hmm | |
11719:11735 | + | 0.9 | AGGACCGCGACCACC | hmm | |
631767:631781 | - | 17.98676449 | CTCGACCCGGTCCA | pwm | |
1075274:1075288 | + | 18.39240329 | GGGACCGAAGCTAA | pwm | |
1135265:1135279 | + | 18.88598027 | TAGACCTTGTCGAA | pwm | |
1235340:1235354 | - | 18.35873327 | TTCGATCTTGTCCA | pwm | |
1235341:1235355 | + | 18.10837269 | TCGATCTTGTCCAA | pwm | |
1287628:1287642 | + | 19.79411941 | TGGACCGTGTCCAG | pwm | |
1609658:1609672 | - | 19.01651183 | TTACACAATTTCCA | pwm | |
1826422:1826436 | - | 18.48926483 | TCAGACGCGTTCCA | pwm | |
2316920:2316934 | + | 18.76437207 | TGGACAGAGCCGAA | pwm | |
2712100:2712114 | + | 19.79411941 | TGGACCTGGTCTAT | pwm | |
2735596:2735610 | + | 23.25355103 | TGGACATTGTCTAA | pwm | |
2956712:2956726 | + | 19.38848061 | TGGAACTCGTCCAA | pwm | |
3014819:3014833 | - | 18.86123361 | TTAGACTGATTCCA | pwm | |
3174740:3174754 | - | 19.38848061 | TTCGATCAGTTCCA | pwm | |
3190705:3190719 | - | 19.01651183 | GTGGACCCGTTCCA | pwm | |
3198064:3198078 | - | 18.51401149 | TCAGACTAGTTCTA | pwm | |
3227207:3227221 | - | 19.79411941 | TGGGACCCGGTCCA | pwm | |
3378806:3378820 | + | 19.38848061 | TGGATCTGGTCGAA | pwm | |
4089153:4089167 | + | 19.26687241 | TGGTCGGAATCTAA | pwm | |
4258505:4258519 | + | 18.39240329 | TGGACCGAGCCTAG | pwm | |
4722258:4722272 | + | 18.35873327 | TCGACCGGATCGAA | pwm | |
4879566:4879580 | - | 17.98676449 | TTAGATTGGATCCG | pwm | |
5356768:5356782 | + | 17.98676449 | TGGACCGGATCAAC | pwm | |
5681011:5681025 | - | 17.98676449 | TCCGACACGGTCCA | pwm | |
5923036:5923050 | - | 17.73640391 | CTGGACCAGATCCA | pwm | |
6179570:6179584 | - | 17.98676449 | GTCGATTCGTTCCA | pwm | |
6196816:6196830 | + | 18.39240329 | TGGACCGAATGTCA | pwm | |
6440707:6440721 | - | 17.85623293 | TTGGACTTTGTCGA | pwm | |
6640380:6640394 | + | 18.48926483 | TGGAGCGTGTCTCA | pwm | |
7254878:7254892 | - | 18.76437207 | ATCGATTCGGTCCA | pwm | |
7491544:7491558 | - | 18.51401149 | GTGGATCAGGTCCA | pwm | |
7923017:7923031 | - | 19.38848061 | TTCGATCCGTTCTA | pwm | |
8158544:8158558 | + | 17.98676449 | TGGCCAGGGTCGAA | pwm | |
8256597:8256611 | - | 17.98676449 | TTCGACACTGCCCA | pwm | |
76872:76888 | + | 1.0 | ACGGAGCTCGTCGAA | hmm | |
164931:164947 | - | 0.1 | CGCGGAGTGAATCCA | hmm | |
339805:339821 | - | 0.6 | AGTCGAACTGGTCCA | hmm | |
342748:342764 | - | 0.4 | TCTTGATCTTGTCCA | hmm | |
404631:404647 | + | 2.8 | ATGGATCAGGTCTAC | hmm | |
404632:404648 | - | 1.4 | GGTAGACCTGATCCA | hmm | |
454859:454875 | - | 0.5 | CATGGACGTCATCGA | hmm | |
551200:551216 | + | 1.3 | GTGGAGCCGGTCCAG | hmm | |
551201:551217 | - | 1.2 | CCTGGACCGGCTCCA | hmm | |
593895:593911 | + | 1.5 | CAGGACCGCGTCCAC | hmm | |
689863:689879 | - | 0.5 | CCTGGACTGTTTCTA | hmm | |
797655:797671 | - | 0.8 | GCGGGAGCTTGTCCA | hmm | |
860957:860973 | + | 0.3 | CTTGAACGCGTTCAA | hmm | |
861000:861016 | - | 0.3 | CTTTGAACGTGTTCAA | hmm | |
860959:860975 | - | 0.3 | TATTGAACGCGTTCA | hmm | |
887144:887160 | - | 0.9 | GCGGGACCTCGTCCA | hmm | |
933132:933148 | + | 0.7 | GTGGAGGGCGTCCAC | hmm | |
965265:965281 | + | 1.2 | GTCGAACTCGTCGAA | hmm | |
1011681:1011697 | - | 0.1 | GGCGGATCGATTCCA | hmm | |
1057792:1057808 | + | 1.9 | TGGGAGAGACTCTAA | hmm | |
1120527:1120543 | - | 0.4 | CATCGACCACGTCTA | hmm | |
1135263:1135279 | + | 1.8 | GTAGACCTTGTCGAA | hmm | |
1200979:1200995 | + | 1.1 | CCGGACATGGTCCAC | hmm | |
1235339:1235355 | + | 2.2 | TTCGATCTTGTCCAA | hmm | |
1235340:1235356 | - | 0.3 | CTTGGACAAGATCGA | hmm | |
1287626:1287642 | + | 4.0 | CTGGACCGTGTCCAG | hmm | |
1287627:1287643 | - | 1.5 | GCTGGACACGGTCCA | hmm | |
1299223:1299239 | + | 1.4 | ATGGAAGGGATCCAT | hmm | |
1383136:1383152 | - | 4.1 | ATTGGATCGCGTCCA | hmm | |
1383135:1383151 | + | 0.8 | CTGGACGCGATCCAA | hmm | |
1459849:1459865 | + | 1.5 | TCGGAGCGGGTCCAG | hmm | |
1460083:1460099 | + | 1.0 | GAGGATCTCGTCCAG | hmm | |
1467476:1467492 | + | 1.1 | GTCGAACGGGTCCAC | hmm | |
1477048:1477064 | + | 3.0 | GTCGAGCGCGTCCAA | hmm | |
1625055:1625071 | + | 0.7 | GTGGAGGTGATCCAC | hmm | |
1876861:1876877 | - | 1.7 | CTTTGATCGAATCCA | hmm | |
1930464:1930480 | - | 1.1 | GTTGGAAGGGGTCCA | hmm | |
1930463:1930479 | + | 0.8 | CTGGACCCCTTCCAA | hmm | |
2026169:2026185 | - | 0.8 | TATCGAGCGCATCCA | hmm | |
2067489:2067505 | - | 2.0 | GCTGGAACACGTCCA | hmm | |
2197114:2197130 | - | 0.6 | CCTCGATCTCGTCGAA | hmm | |
2249486:2249502 | - | 3.2 | TATGGAACTCGTCGAA | hmm | |
2290391:2290407 | - | 2.1 | GGCGGATCGTGTCAAA | hmm | |
2493123:2493139 | - | 1.1 | TCAGGAGCGTCTCTA | hmm | |
2514321:2514337 | - | 0.2 | CGAGGACTTCGTCCA | hmm | |
2658593:2658609 | - | 0.9 | CGAGGACCTCGTCCA | hmm | |
2659792:2659808 | + | 0.6 | GTGGAACTGGCCTAT | hmm | |
2712098:2712114 | + | 3.8 | GTGGACCTGGTCTAT | hmm | |
2712099:2712115 | - | 0.3 | TATAGACCAGGTCCA | hmm | |
2735594:2735610 | + | 4.9 | ATGGACATTGTCTAA | hmm | |
2772973:2772989 | + | 0.5 | GTGGATCGCCTTCAA | hmm | |
2777430:2777446 | + | 0.4 | GTCGACCTCGTCGAA | hmm | |
2791227:2791243 | - | 1.1 | TGCGGACCGGGTCCA | hmm | |
2819657:2819673 | - | 0.7 | CGTCGACTGCATCTA | hmm | |
2853672:2853688 | - | 0.9 | CGCAGATCGCGTCCA | hmm | |
2956710:2956726 | + | 4.9 | GTGGAACTCGTCCAA | hmm | |
3014819:3014835 | - | 2.6 | ATTGGAATCAGTCTAA | hmm | |
3014818:3014834 | + | 0.3 | TTAGACTGATTCCAA | hmm | |
3097179:3097195 | - | 0.7 | CGGGGACATCGTCCA | hmm | |
3111187:3111203 | - | 0.6 | AGGGGAGCATATCTA | hmm | |
3162455:3162471 | - | 1.4 | CGTCGAGCGGATCCA | hmm | |
3174740:3174756 | - | 2.7 | GCTGGAACTGATCGAA | hmm | |
3183012:3183028 | + | 0.2 | TTTGAACGCGTTCAA | hmm | |
3183014:3183030 | - | 0.1 | CCTTGAACGCGTTCAA | hmm | |
3190705:3190721 | - | 3.8 | GCTGGAACGGGTCCA | hmm | |
3215800:3215816 | + | 0.8 | GGGGAGCTGATCCAC | hmm | |
3314373:3314389 | + | 1.4 | GTGGATGGGATCCAG | hmm | |
3314374:3314390 | - | 1.0 | TCTGGATCCCATCCA | hmm | |
3329343:3329359 | + | 3.1 | CTGGATCACGTCTAT | hmm | |
3347031:3347047 | + | 0.6 | GTCGATCTGGTCAAA | hmm | |
3378804:3378820 | + | 2.9 | CTGGATCTGGTCGAA | hmm | |
3433802:3433818 | - | 1.1 | GGTCGATCGCGTCCA | hmm | |
3519919:3519935 | + | 0.9 | GCGGAGATGATCCAG | hmm | |
3632030:3632046 | + | 0.1 | CTTGAACGCGTTCAA | hmm | |
3779345:3779361 | - | 0.3 | CCTGGAGGCGGTCTA | hmm | |
3779344:3779360 | + | 0.1 | GTAGACCGCCTCCAG | hmm | |
3779345:3779361 | - | 0.3 | CCTGGAGGCGGTCTA | hmm | |
3779344:3779360 | + | 0.1 | GTAGACCGCCTCCAG | hmm | |
3919370:3919386 | - | 1.0 | CTGGGAGCTGGTCCA | hmm | |
3948309:3948325 | + | 1.3 | CAGGAACGCGTCCAG | hmm | |
4053948:4053964 | - | 2.4 | GGTGGAACAGGTCCA | hmm | |
4053947:4053963 | + | 0.8 | ATGGACCTGTTCCAC | hmm | |
4089151:4089167 | + | 0.2 | CTGGTCGGAATCTAA | hmm | |
4095714:4095730 | + | 2.2 | CTGGACCGCTTCCAC | hmm | |
4200656:4200672 | + | 0.8 | CGGGATGGCGTCCAA | hmm | |
4230974:4230990 | - | 2.2 | TCTGGATCGATTCCA | hmm | |
4230973:4230989 | + | 0.4 | CTGGAATCGATCCAG | hmm | |
4258503:4258519 | + | 1.6 | ATGGACCGAGCCTAG | hmm | |
4336346:4336362 | - | 1.4 | CACGGACCGGATCCA | hmm | |
4459402:4459418 | - | 1.5 | GTGGGATCGCATCAAA | hmm | |
4705078:4705094 | - | 1.3 | GGTCGAGCGGGTCCA | hmm | |
4711022:4711038 | - | 0.3 | CATGGAGCGGGCCAA | hmm | |
4722256:4722272 | + | 0.9 | ATCGACCGGATCGAA | hmm | |
4727732:4727748 | - | 1.2 | CATGGAACACATCCA | hmm | |
4762275:4762291 | + | 1.9 | TCGGACATTGTCTAT | hmm | |
4850450:4850466 | + | 1.8 | CGGGATCTCGTCTAC | hmm | |
4879566:4879582 | - | 1.9 | ATCGGATCCAATCTAA | hmm | |
5448067:5448083 | - | 0.1 | GGTCGATCTCGTCCA | hmm | |
5450826:5450842 | - | 1.2 | CGCGGAACTGGTCCA | hmm | |
5486555:5486571 | - | 0.6 | GTTCGAACTCGTCCA | hmm | |
5540225:5540241 | - | 1.1 | CTCGGATCTCGTCCA | hmm | |
5793240:5793256 | - | 0.5 | CCGGGACCTTATCCA | hmm | |
5811442:5811458 | - | 2.1 | GCTGGAGCGCTTCGAA | hmm | |
5923036:5923052 | - | 2.9 | CCTGGATCTGGTCCA | hmm | |
5923035:5923051 | + | 1.5 | CTGGACCAGATCCAG | hmm | |
6105292:6105308 | - | 0.6 | CGTGCATCGAATCTA | hmm | |
6139270:6139286 | + | 1.7 | CCGGATCGAGTCCAG | hmm | |
6149034:6149050 | - | 0.3 | CCTGGAAGAAGTCCA | hmm | |
6294679:6294695 | - | 1.8 | GATAGATAGCGTCAA | hmm | |
6337664:6337680 | - | 0.5 | GGTGGAGGTCGTCCA | hmm | |
6381040:6381056 | + | 1.0 | CTGGATGTGGTCTAT | hmm | |
6381040:6381056 | + | 1.0 | CTGGATGTGGTCTAT | hmm | |
6402759:6402775 | + | 0.4 | CTGGAGGATGTCTAT | hmm | |
6422858:6422874 | - | 0.6 | CGAGGAACTGATCCA | hmm | |
6440706:6440722 | + | 0.7 | TTGGACTTTGTCGAA | hmm | |
6484126:6484142 | - | 0.3 | CGTCGACGGCGTCTA | hmm | |
6517929:6517945 | - | 1.0 | CCTGGAGCTTCTCTA | hmm | |
6522397:6522413 | - | 1.1 | CGAGGAGATCGTCCA | hmm | |
6522611:6522625 | + | 0.7 | TTGGAAAGTCCAA | hmm | |
6570161:6570177 | + | 1.2 | GTGGACGGCGTCCAG | hmm | |
6578516:6578532 | + | 0.1 | CTGGGCCTGATCTAC | hmm | |
6586028:6586044 | + | 1.4 | TGGGAACGCGTCCAG | hmm | |
6600410:6600426 | - | 0.9 | CGTGGAGCTCCTCGAA | hmm | |
6605551:6605567 | - | 1.2 | GGTCGATCGGGTCGAA | hmm | |
6834314:6834330 | + | 1.6 | CTGGACCTCTTCCAG | hmm | |
6845289:6845305 | + | 0.5 | TGGGAGATCATCCAT | hmm | |
6879152:6879168 | + | 0.6 | GAGGAGCGCTTCCAG | hmm | |
7052686:7052702 | - | 0.4 | CGTCGACCTTGTCCA | hmm | |
7257218:7257234 | - | 1.0 | CGTAGAAGGCGTCCA | hmm | |
7379746:7379762 | + | 1.2 | CCGGACATCGTCCAG | hmm | |
7435313:7435329 | - | 0.7 | GCGGGACCTGATCGAA | hmm | |
7457904:7457920 | + | 1.1 | GAGGACCGCGTCCAG | hmm | |
7491544:7491560 | - | 2.8 | GATGGACCTGATCCA | hmm | |
7491543:7491559 | + | 2.1 | GTGGATCAGGTCCAT | hmm | |
7510388:7510404 | + | 0.2 | GTCGATCGGCTCCAA | hmm | |
7546969:7546985 | - | 1.0 | CGTCGATCGCGTCCA | hmm | |
7636952:7636968 | + | 3.2 | ATGGACTTCGTCCAA | hmm | |
7654821:7654837 | - | 1.4 | GGTGGAAGGAATCCA | hmm | |
7706116:7706132 | + | 1.2 | GAGGAACTCGTCCAG | hmm | |
7786425:7786441 | + | 3.0 | ATGGAGCTGATCCAG | hmm | |
7786113:7786129 | + | 1.4 | GTGGAGATCCTCTAC | hmm | |
7787846:7787862 | - | 1.3 | GGCAGAACTCGTCTA | hmm | |
7850358:7850374 | + | 1.4 | CGGGATCGCGTCCAG | hmm | |
7869253:7869269 | - | 1.8 | GCAGGATCGAGTCCA | hmm | |
7923017:7923033 | - | 2.1 | CGTAGAACGGATCGA | hmm | |
7928431:7928447 | - | 0.9 | CGGGGAGCGCGTCCA | hmm | |
7963896:7963912 | - | 1.2 | GGTCGAGCGGATCCA | hmm | |
7978283:7978299 | + | 2.5 | GTCGATCGGGTCTAG | hmm | |
7984753:7984769 | - | 2.0 | CGTGGATCACGTCCA | hmm | |
7984752:7984768 | + | 0.8 | CTGGACGTGATCCAC | hmm | |
8006233:8006249 | - | 1.1 | GCCGGAGCGGGTCCA | hmm | |
8065152:8065168 | - | 1.2 | TACGGAGCGAGTCGAA | hmm | |
8075648:8075664 | + | 1.8 | GTGGAATGCCTCCAA | hmm | |
8292744:8292760 | - | 1.2 | GCTGGACTTCATCCA | hmm | |
8324992:8325007 | - | 0.1 | CATGGACGAATCCAA | hmm | |
8469041:8469057 | - | 1.0 | CACGGAGCTCGTCGAA | hmm | |
976910:976924 | - | 18.39240329 | GTAAACTCTGTCCA | pwm | |
1483338:1483352 | + | 19.63884119 | TGGAGCGAGTCGAA | pwm | |
1651313:1651327 | + | 17.98676449 | TCGACAGGGTCTGA | pwm | |
1993788:1993802 | - | 19.79411941 | TTGGCCCCGGTCCA | pwm | |
2132819:2132833 | + | 17.98676449 | TGGACCGACACCAA | pwm | |
2177584:2177598 | + | 18.76437207 | TGGGCCCAATCTAA | pwm | |
2553478:2553492 | + | 20.66858853 | TGGATCGGGTCGAA | pwm | |
2570955:2570969 | - | 18.86123361 | TTAGAACGGGTCCA | pwm | |
2570956:2570970 | + | 21.19583553 | TAGAACGGGTCCAA | pwm | |
2570976:2570990 | + | 19.38848061 | TAGAACGGGTCGAA | pwm | |
3067119:3067133 | + | 18.48926483 | TGGAGAGGGTCTGA | pwm | |
3203019:3203033 | - | 17.98676449 | TGAGACCCTGTCGA | pwm | |
3210750:3210764 | - | 18.39240329 | TCACATTCTGTCCA | pwm | |
3257970:3257984 | - | 20.66858853 | TTGGATGCGTTCCA | pwm | |
3575275:3575289 | + | 18.51401149 | TAGTCCGGGTCCAA | pwm | |
3612203:3612217 | + | 19.79411941 | CGGACCGTGTCCAA | pwm | |
3646310:3646324 | - | 17.98676449 | GTAGACCCGGTCGA | pwm | |
4480864:4480878 | + | 17.98676449 | TGGATCGAGTCGGA | pwm | |
4695329:4695343 | - | 19.38848061 | TTCGACCAGATCCA | pwm | |
5019625:5019639 | - | 21.44619611 | TTAGATTCAGTCTA | pwm | |
5079921:5079935 | + | 18.39240329 | TGGACCGAGCGTAA | pwm | |
5087406:5087420 | + | 18.35873327 | TGGACCTCGTCGAA | pwm | |
5152091:5152105 | + | 17.98676449 | TGGACCGCATCCAC | pwm | |
5235623:5235637 | - | 20.16608819 | TTAGACATTGTCTA | pwm | |
5235624:5235638 | + | 18.51401149 | TAGACATTGTCTAT | pwm | |
5339332:5339346 | - | 20.16608819 | TTCGACCATGTCCA | pwm | |
5585710:5585724 | - | 18.51401149 | TTGGACCCGGTCTT | pwm | |
5632809:5632823 | + | 18.48926483 | TGGAGCGGATCTAT | pwm | |
5819323:5819337 | + | 17.98676449 | TGGAACGAACCGAA | pwm | |
5822780:5822794 | + | 17.98676449 | TGGACCGCATCCAG | pwm | |
6271259:6271273 | + | 17.98676449 | TGGACAGCATCCAC | pwm | |
6436863:6436877 | - | 18.39240329 | CTAGATTCGGCCCA | pwm | |
6446983:6446997 | - | 20.66858853 | TTGGACCCAGTCCA | pwm | |
6494217:6494231 | - | 18.39240329 | TTAGGTTCGGCCCA | pwm | |
6641531:6641545 | - | 17.98676449 | TTCGACCCGGGCCA | pwm | |
7033287:7033301 | + | 18.35873327 | TCGACCGGATCGAA | pwm | |
7252550:7252564 | - | 18.35873327 | TTCGACTCGATCGA | pwm | |
7396870:7396884 | - | 17.98676449 | TCGGACTCCGTCCA | pwm | |
7971352:7971366 | + | 17.98676449 | TGGACCGCGTCCCA | pwm | |
8027179:8027193 | + | 19.79411941 | TAGACAGTGTCTAC | pwm | |
8027202:8027216 | - | 17.98676449 | GTAGACAGTGTCCA | pwm | |
8027203:8027217 | + | 18.51401149 | TAGACAGTGTCCAT | pwm | |
8068501:8068515 | + | 24.03115861 | TGGACAGAGTCCAA | pwm | |
8158536:8158550 | + | 18.86123361 | TGGATGGAGTCGAA | pwm | |
8221960:8221974 | - | 18.48926483 | TTAGACCCTCGCCA | pwm | |
4986:5002 | - | 0.7 | CGCAGATCGCTTCCAA | hmm | |
9407:9423 | - | 0.3 | CGTAGAACGCCTCGAA | hmm | |
14953:14969 | - | 1.0 | TGTCGAGCGCGTCGAA | hmm | |
23537:23553 | + | 0.8 | CTGGAAGTAATCCAT | hmm | |
89325:89341 | - | 3.4 | AGTGGAACTCGTCCA | hmm | |
136025:136041 | + | 1.0 | CCGGACCCCGTCTAC | hmm | |
140242:140258 | - | 0.5 | ACCGGATCCCGTCCAA | hmm | |
339842:339858 | + | 1.1 | CAGGAGCTCGTCCAT | hmm | |
713431:713447 | - | 0.4 | ATGGGACGGCATCTA | hmm | |
743911:743927 | - | 0.5 | CGTTGATCTCGTCCA | hmm | |
766333:766349 | - | 0.3 | ACCGGACCTCCTCCA | hmm | |
818939:818955 | + | 1.1 | CCGGACCTCGTCCAT | hmm | |
862360:862376 | - | 0.1 | TGTCGAGCTCGTCCA | hmm | |
952598:952614 | + | 0.1 | CTGGACGGCTTCCAC | hmm | |
986559:986575 | - | 1.2 | GGTGGACCGCCTCCA | hmm | |
997341:997357 | - | 1.1 | GATCGACCGCGTCCA | hmm | |
1056388:1056404 | + | 1.5 | ACGGAGCGAATCCAG | hmm | |
1061940:1061956 | - | 1.7 | CATGGAACGCCTCCA | hmm | |
1136122:1136138 | - | 0.1 | CGTGGAGGACATCTA | hmm | |
1168706:1168722 | - | 1.7 | GCGGGACCTGATCTA | hmm | |
1256317:1256333 | - | 0.4 | GCCGGACGACATCTAA | hmm | |
1268697:1268713 | + | 1.2 | CTGGACGGCGTCGAA | hmm | |
1311621:1311637 | + | 0.4 | CTGGAGCTGCTCCAG | hmm | |
1379100:1379116 | + | 1.1 | CTGGAAGGGGTCCAG | hmm | |
1408254:1408270 | - | 0.7 | CAGGGAGCTCATCCA | hmm | |
1421824:1421840 | + | 1.4 | GAGGAGCTCGTCCAT | hmm | |
1483336:1483352 | + | 3.5 | CTGGAGCGAGTCGAA | hmm | |
1513474:1513490 | - | 1.6 | GCAGGACCGAGTCCA | hmm | |
1571426:1571442 | + | 1.2 | CCGGACCTTGTCGAA | hmm | |
1587174:1587190 | - | 2.7 | ACTCGACCGCGTCTA | hmm | |
1616258:1616274 | - | 4.0 | CCTGGAGCGCATCCA | hmm | |
1632313:1632329 | + | 0.3 | CGGGACGGCGTCTAC | hmm | |
1659473:1659489 | - | 0.4 | CATCGACCTTGTCGAA | hmm | |
1678872:1678888 | - | 1.5 | GAAGGAGCGCGTCCA | hmm | |
1741216:1741232 | + | 1.4 | GAGGAACGGGTCCAC | hmm | |
1761443:1761459 | - | 2.8 | GGACCGAGTCCAA | hmm | |
1777825:1777841 | + | 2.0 | CTGGACGGCATCCAG | hmm | |
1781431:1781447 | + | 1.5 | CGGGATCGGATCCAT | hmm | |
1836117:1836133 | - | 0.6 | ACTCGACCTCGTCAAA | hmm | |
1888068:1888084 | - | 0.6 | CATGGACCTTGCCTA | hmm | |
1917001:1917017 | + | 0.3 | GGGGACAGCGTCGAA | hmm | |
1927490:1927506 | - | 3.0 | CATGGAGATCGTCCA | hmm | |
1993788:1993804 | - | 0.5 | CCTGGACCGGGGCCAA | hmm | |
2006758:2006774 | - | 0.4 | CGTGGAGTACGTCCA | hmm | |
2033982:2033998 | - | 1.7 | TGTGGATCCTGTCGAA | hmm | |
2034137:2034153 | - | 1.3 | AACGGAGTGCGTCTA | hmm | |
2033981:2033997 | + | 0.9 | TTCGACAGGATCCAC | hmm | |
2121937:2121953 | + | 1.3 | GTGGATCGAGCCTAT | hmm | |
2127546:2127562 | + | 0.7 | GCGGAGCCTGTCCAA | hmm | |
2129510:2129526 | + | 1.3 | CTAGACGGCATCTAT | hmm | |
2141873:2141889 | + | 2.5 | CTGGAGACCGTCTAC | hmm | |
2177582:2177598 | + | 0.4 | ATGGGCCCAATCTAA | hmm | |
2204328:2204344 | - | 2.9 | AGTGGATCTCGTCCA | hmm | |
2240107:2240123 | - | 2.9 | TACGGAGCGAATCTA | hmm | |
2268006:2268022 | - | 1.3 | TTCGGAGCGGATCGAA | hmm | |
2278622:2278638 | - | 0.1 | CGCGGAGAAGGTCTA | hmm | |
2417059:2417075 | - | 3.0 | TGTAGATCGCGTCCA | hmm | |
2417058:2417074 | + | 0.3 | ATGGACGCGATCTAC | hmm | |
2547055:2547071 | - | 0.3 | AGGGGAGCCGATCTA | hmm | |
2553476:2553492 | + | 3.3 | GTGGATCGGGTCGAA | hmm | |
2570954:2570970 | + | 4.5 | TTAGAACGGGTCCAA | hmm | |
2570974:2570990 | + | 3.1 | CTAGAACGGGTCGAA | hmm | |
2570955:2570971 | - | 1.9 | GTTGGACCCGTTCTAA | hmm | |
2582704:2582720 | + | 1.1 | ATGAATCGAATCTAG | hmm | |
2701862:2701878 | + | 1.3 | CTCGATCGCGTCCAG | hmm | |
2724020:2724036 | - | 0.1 | CATGGCCAGGGTCTA | hmm | |
2879589:2879605 | - | 0.5 | CGTGGCGAGGATCTA | hmm | |
2963115:2963131 | - | 0.5 | TCTCGATCACGTCTA | hmm | |
3032249:3032265 | - | 1.3 | CGCGGAGAGCGTCCA | hmm | |
3171748:3171764 | + | 0.8 | GTGGACGTCGTCCAT | hmm | |
3222338:3222354 | + | 0.2 | CTGGACATCGACTAC | hmm | |
3245106:3245122 | + | 1.0 | CAGGACCTGGTCCAC | hmm | |
3253234:3253250 | - | 1.2 | GCCGGAACTCGTCGAA | hmm | |
3257970:3257986 | - | 5.5 | TATGGAACGCATCCAA | hmm | |
3288234:3288250 | - | 1.5 | TATGGAGCTGCTCTA | hmm | |
3482484:3482500 | - | 1.5 | CCTTGAGCGCATCCA | hmm | |
3485951:3485967 | + | 0.9 | GTCGACCGCGTCCAC | hmm | |
3539268:3539284 | + | 2.9 | GTGGAGATTGTCCAT | hmm | |
3575273:3575289 | + | 0.8 | ATAGTCCGGGTCCAA | hmm | |
3612201:3612217 | + | 3.3 | ACGGACCGTGTCCAA | hmm | |
3646310:3646326 | - | 2.3 | CGTCGACCGGGTCTA | hmm | |
3664658:3664674 | - | 0.8 | CTGGGAGCTCGTCCA | hmm | |
3702442:3702458 | - | 1.2 | CGTGGAACTCCTCCA | hmm | |
3731073:3731089 | - | 1.2 | GGTGGACGGCGTCCA | hmm | |
3798475:3798491 | + | 0.9 | CCGGAGCTGGTCCAG | hmm | |
3798434:3798450 | - | 0.8 | CCTGGAGGTCATCCA | hmm | |
3933107:3933123 | + | 1.6 | GTTGACCGCGTCGAA | hmm | |
3937124:3937140 | + | 0.8 | GTGGACGTCATCCA | hmm | |
3955400:3955416 | - | 0.4 | CTCGGACCGGCTCTA | hmm | |
3957794:3957810 | - | 0.4 | TCTTGACCTCGTCCA | hmm | |
3971557:3971573 | - | 1.9 | TCCGGATCGTGTCCA | hmm | |
4075259:4075275 | - | 2.1 | CCTTGAGCTTGTCCAA | hmm | |
4075259:4075275 | - | 2.1 | CCTTGAGCTTGTCCAA | hmm | |
4093364:4093380 | - | 1.5 | TGTCGATCGCGTCCA | hmm | |
4140560:4140576 | - | 0.7 | CGTGGATCTTTTCTA | hmm | |
4213775:4213791 | - | 1.5 | GCCGGACAGGGTCCA | hmm | |
4269305:4269323 | - | 0.1 | CCTGGAAATGGCGTCCAA | hmm | |
4287408:4287424 | - | 0.8 | GATGGACCGGGACTA | hmm | |
4311001:4311017 | - | 1.1 | GGTCGAGCGGGTCCA | hmm | |
4316821:4316837 | - | 1.1 | CGTGGAGTTCATCCA | hmm | |
4371241:4371257 | - | 0.7 | GGTGGACCTGACCTA | hmm | |
4383965:4383981 | - | 1.7 | GCTTGATCGCGTCCA | hmm | |
4488040:4488056 | - | 1.6 | TCAGGACCGTGTCCA | hmm | |
4576593:4576609 | - | 0.7 | CTGGGAGCTCGTCGAA | hmm | |
4692359:4692375 | - | 2.9 | GATGGAGCACGTCTA | hmm | |
4695329:4695345 | - | 2.8 | TCTGGATCTGGTCGAA | hmm | |
4697802:4697818 | - | 0.6 | CCGGGAACTCATCCA | hmm | |
4703114:4703130 | - | 1.1 | TCCGGAGCTCGTCGAA | hmm | |
4718644:4718660 | - | 0.1 | CCTGGAGAAGTTCTA | hmm | |
4740073:4740089 | - | 3.1 | GCTGGATCACGTCTA | hmm | |
4739901:4739917 | - | 3.0 | GCTGGATCACGTCTA | hmm | |
4754972:4754988 | - | 1.1 | AGTGGATGGAGTCCA | hmm | |
4759340:4759356 | + | 1.2 | CCGGACCTCGTCCAG | hmm | |
4869723:4869739 | - | 1.9 | CCAGGACCGAGTCCA | hmm | |
4881332:4881348 | + | 0.3 | TTTGAACGTGTTCAA | hmm | |
4881288:4881304 | + | 0.1 | CTTGAACGCGTTCAA | hmm | |
4922920:4922936 | - | 2.0 | ACTGGACCGGTTCCA | hmm | |
4922919:4922935 | + | 1.4 | GTGGAACCGGTCCAG | hmm | |
4960421:4960437 | + | 0.5 | ATCGAGATGGTCCAG | hmm | |
5019625:5019641 | - | 2.4 | TTTAGACTGAATCTAA | hmm | |
5019624:5019640 | + | 0.9 | TTAGATTCAGTCTAA | hmm | |
5087404:5087420 | + | 3.2 | ATGGACCTCGTCGAA | hmm | |
5152089:5152105 | + | 4.0 | GTGGACCGCATCCAC | hmm | |
5235622:5235638 | + | 1.6 | TTAGACATTGTCTAT | hmm | |
5235623:5235639 | - | 1.5 | GATAGACAATGTCTAA | hmm | |
5238499:5238515 | - | 2.1 | CATGGACCGTTTCCA | hmm | |
5238498:5238514 | + | 1.4 | CTGGAAACGGTCCAT | hmm | |
5291265:5291281 | - | 0.4 | CGAGGACCTCATCCA | hmm | |
5308072:5308088 | + | 1.2 | ATCGAGCAGGTCTAC | hmm | |
5319622:5319638 | - | 0.6 | AGTGGAACTGGCCTA | hmm | |
5339332:5339348 | - | 2.3 | CGTGGACATGGTCGAA | hmm | |
5393377:5393393 | + | 0.4 | CCGGACACGGTCCAA | hmm | |
5421067:5421083 | - | 1.9 | GGTTGATCGGGTCCA | hmm | |
5429041:5429057 | + | 0.8 | TAGGAGCTTATCCAG | hmm | |
5432053:5432069 | + | 1.5 | CTGGAGAATGTCCAG | hmm | |
5432054:5432070 | - | 0.9 | GCTGGACATTCTCCA | hmm | |
5458697:5458713 | + | 0.3 | GTGGAGTGCTTCTAG | hmm | |
5610590:5610608 | + | 0.3 | TTGGACAGCCCGTCCAA | hmm | |
5632807:5632823 | + | 5.0 | CTGGAGCGGATCTAT | hmm | |
5647684:5647700 | - | 0.8 | TCGGGATCTGGTCCA | hmm | |
5717873:5717889 | - | 1.0 | AGCGGACCTGGTCCA | hmm | |
5732657:5732673 | + | 2.1 | GTGGACGGCGTCTAC | hmm | |
5789461:5789477 | - | 1.2 | TGTGGACCGCCTCCA | hmm | |
5822778:5822794 | + | 4.0 | GTGGACCGCATCCAG | hmm | |
5855087:5855103 | + | 0.7 | CTGGATCTCGGCCAA | hmm | |
5858008:5858024 | + | 0.4 | CTGGAACTGCTCCAC | hmm | |
5902519:5902535 | - | 1.0 | CCTGGAGGGAGTCCA | hmm | |
5949522:5949538 | + | 0.8 | ATCGAGCGCATCCAC | hmm | |
6137916:6137932 | - | 0.4 | TCGGGAAGGTGTCCA | hmm | |
6202229:6202245 | - | 0.4 | AGTGGTTCTCGTCCAA | hmm | |
6271257:6271273 | + | 3.9 | CTGGACAGCATCCAC | hmm | |
6385562:6385578 | - | 1.3 | ACCGGAACGGATCCA | hmm | |
6431567:6431583 | - | 0.9 | CCTCGACCGGGTCCA | hmm | |
6436863:6436879 | - | 0.6 | CATGGGCCGAATCTA | hmm | |
6446983:6446999 | - | 4.3 | GCTGGACTGGGTCCAA | hmm | |
6446982:6446998 | + | 1.3 | TTGGACCCAGTCCAG | hmm | |
6561580:6561596 | - | 0.9 | CCCGGACAACGTCTA | hmm | |
6571383:6571399 | - | 0.5 | ACAGGAAAGACTCTA | hmm | |
6587046:6587062 | - | 1.5 | CGCGGAGAGTATCCA | hmm | |
6702755:6702771 | + | 1.1 | ATCGACCTGGTCTAC | hmm | |
6759679:6759695 | + | 1.1 | TCGGAACTCATCCAC | hmm | |
6805100:6805116 | - | 0.1 | CGTCGAGCTCGTCCA | hmm | |
6858068:6858084 | - | 1.5 | GCCGGACCGCGTCCA | hmm | |
6911423:6911439 | + | 1.2 | ATCGATCTCGTCTAC | hmm | |
6965889:6965905 | - | 1.1 | GGTCGAGCGGGTCCA | hmm | |
6996214:6996230 | - | 0.4 | CGTTGACCTTGTCCA | hmm | |
7033285:7033301 | + | 1.0 | CTCGACCGGATCGAA | hmm | |
7035932:7035948 | - | 0.1 | TGTCGACCTCGTCCA | hmm | |
7125258:7125274 | + | 1.0 | GTCGAGCGCGTCGAA | hmm | |
7164345:7164361 | + | 2.1 | CTGGAACGGTTCCAC | hmm | |
7236402:7236418 | - | 0.2 | TCGGGATCGCCTCCAA | hmm | |
7252550:7252566 | - | 1.6 | GATCGATCGAGTCGAA | hmm | |
7458433:7458449 | + | 0.2 | CTTGAACGTGTTCAA | hmm | |
7458392:7458408 | + | 0.1 | CTTGAACGCGTTCAA | hmm | |
7463485:7463501 | - | 0.4 | CGCGGAGCGCTTCCA | hmm | |
7596343:7596359 | + | 1.3 | CTGGACCGCCTCCAC | hmm | |
7611281:7611297 | + | 1.4 | ACGGAGCGGATCCAT | hmm | |
7628220:7628236 | + | 1.5 | GTGGACACCGTCCAC | hmm | |
7628221:7628237 | - | 1.1 | AGTGGACGGTGTCCA | hmm | |
7665537:7665553 | + | 0.9 | GTCGACCGCGTCCAG | hmm | |
7670598:7670614 | - | 1.1 | GGCGGAGCGCTTCTA | hmm | |
7764718:7764734 | + | 1.4 | GCGGATCGCATCGAA | hmm | |
7919292:7919308 | + | 1.4 | GGGGAACGGATCCAG | hmm | |
7997135:7997151 | + | 0.1 | GTCGAGCTCGTCCAC | hmm | |
8006870:8006886 | + | 0.5 | GTGGAGATCGCCTAC | hmm | |
8008825:8008841 | - | 1.1 | ACTCGAACGGGTCGAA | hmm | |
8010165:8010181 | - | 1.4 | CGTCGACCGCGTCGAA | hmm | |
8027177:8027193 | + | 3.1 | GTAGACAGTGTCTAC | hmm | |
8027201:8027217 | + | 2.6 | GTAGACAGTGTCCAT | hmm | |
8027202:8027218 | - | 2.5 | CATGGACACTGTCTA | hmm | |
8027178:8027194 | - | 1.2 | AGTAGACACTGTCTA | hmm | |
8027155:8027171 | - | 0.7 | CGTAGACAACGTCTA | hmm | |
8068499:8068515 | + | 5.4 | ATGGACAGAGTCCAA | hmm | |
8068500:8068516 | - | 0.2 | CTTGGACTCTGTCCA | hmm | |
8158534:8158550 | + | 0.6 | ATGGATGGAGTCGAA | hmm | |
8221179:8221195 | - | 1.7 | TCTGGACAGCCTCCA | hmm | |
8221960:8221976 | - | 1.9 | ATTGGCGAGGGTCTAA | hmm |